DRAGEN-GATK Best Practices: A Deep Dive into Genomic Analysis Pipeline Improvements
Bioinformatics Tools | How to Install GATK | Binaries - YouTube
Broad Institute to release Genome Analysis Toolkit 4 (GATK4) as open source resource to accelerate research | Broad Institute
GATK Best Practices Workshop | Edinburgh Genomics
038. Run the germline GATK Best Practices Pipeline for 5 per genome - Legacy GATK Forum
Somatic Variant Pipeline | Plataforma Andaluza de Medicina Computacional
Genes | Free Full-Text | SparkRA: Enabling Big Data Scalability for the GATK RNA-seq Pipeline with Apache Spark
Calling variants on cohorts of samples using the HaplotypeCaller in GVCF mode - Legacy GATK Forum
Accuracy and efficiency of germline variant calling pipelines for human genome data | Scientific Reports
The GATK workflow for NGS data analysis. | Download Scientific Diagram
GitHub - crukci-bioinformatics/gatk-tools: Utilities for processing sequencing data and genomic variants using GATK
Full release of open-source DRAGEN-GATK 1.0 – GATK
Optimizing performance of GATK workflows using Apache Arrow In-Memory data framework | BMC Genomics | Full Text
Broad Institute releases open-source GATK4 software for genome analysis, optimized for speed and scalability | Broad Institute
Protocol for unbiased, consolidated variant calling from whole exome sequencing data - ScienceDirect
1. Introduction to GATK Workshop - YouTube
Germline short variant discovery (SNPs + Indels) - Legacy GATK Forum
Introducing GATK "Biggest Practices" for Joint Calling Supersized Cohorts – GATK
GATK
Genome Analysis ToolKit (GATK) - Bioinformatics Team (BioITeam) at the University of Texas - UT Austin Wikis
GATK | Breda Genetics srl
The GATK Best Practices for variant calling on RNAseq | RNA-Seq Blog
GitHub - broadinstitute/GATK-for-Microbes
Amazon.fr - Genomics in the Cloud: Using Docker, GATK, and WDL in Terra - Auwera, Geraldine van der, O'Connor, Brian D. - Livres
🗓️ DRAGEN-GATK Webinar [Oct. 21, 2022] – GATK
DP for each variant bulk is skewed towards 50 and multiples of 50 – GATK
